Publications
- [ 2024 ]
- [ 2023 ]
- [ 2022 ]
- [ 2021 ]
- [ 2020 ]
- [ 2019 ]
- [ 2018 ]
- [ 2017 ]
- [ 2016 ]
- [ 2015 ]
- [ 2014 ]
- [ 2013 ]
- [ 2009 ]
2024[ to top ]
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Insights into the relationship between hydraulic safety, hydraulic efficiency and tree structural complexity from terrestrial laser scanning and fractal analysis. . In Trees, 38(221-239). 2024.
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Inference of alveolar capillary network connectivity from blood flow dynamics. . In American Journal of Physiology-Lung Cellular and Molecular Physiology. American Physiological Society, 2024.
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Self-organization as a mechanism of resilience in dryland ecosystems. . In PNAS, 121, p. e2305153121. 2024.
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Semi-automated sequence curation for reliable reference datasets in ITS2 vascular plant DNA (meta-)barcoding. . In Scientific Data, 11(1), p. 129. 2024.
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mTOR controls growth and internal architecture of human breast cancer spheroids. . In bioRxiv, p. 2024.02.24.580871. Cold Spring Harbor Laboratory, 2024.
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Cardiac function in a large animal model of myocardial infarction at 7 T: deep learning based automatic segmentation increases reproducibility. . In Scientific Reports, 14(1), p. 11009. 2024.
2023[ to top ]
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The salt-and-pepper pattern in mouse blastocysts is compatible with signalling beyond the nearest neighbours. . In iScience, p. 108106. Elsevier {BV}, 2023.
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Formative Integration of Julia Code into the Unity Game Engine:The Use Case of Diving into Aquatic Plant Growth. . 2023.
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{The Effect of Mating Complexity on Gene Drive Dynamics}. . In The American Naturalist, 201(1), pp. E1-E22. 2023.
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Adjusting the range of cell--cell communication enables fine-tuning of cell fate patterns from checkerboard to engulfing. . In Journal of Mathematical Biology, 87(4), p. 54. 2023.
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Tissues as networks of cells: towards generative rules of complex organ development. . In Journal of The Royal Society Interface, 20(204), p. 20230115. The Royal Society, 2023.
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Ten (mostly) simple rules to future-proof trait data in ecological and evolutionary sciences. . In Methods in Ecology and Evolution, 14(2), K. Bacon (ed.), pp. 444–458. 2023.
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Inter- and intraspecific phytochemical variation correlate with epiphytic flower and leaf bacterial communities. . In Environmental Microbiology. Wiley, 2023.
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Recognition and reconstruction of cell differentiation patterns with deep learning. . In PLOS Computational Biology, 19(10), pp. 1–29. Public Library of Science, 2023.
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Potential change in the future spatial distribution of submerged macrophyte species and species richness: the role of today’s lake type and strength of compounded environmental change. . In Oikos, accepted. 2023.
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MyoPS: A benchmark of myocardial pathology segmentation combining three-sequence cardiac magnetic resonance images. . In Medical Image Analysis, p. 102808. 2023.
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The road to integrate climate change effects on land-use change in regional biodiversity models. . In People & Nature, accepted. 2023.
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Novel integrative elements and genomic plasticity in ocean ecosystems. . In Cell, 186(1), pp. 47–62.e16. Elsevier, 2023.
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{Opportunistic Bacteria of Grapevine Crown Galls Are Equipped with the Genomic Repertoire for Opine Utilization}. . In Genome Biology and Evolution, 15(12), p. evad228. 2023.
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User-Centered Engineering of an Interactive Land Use Exploration Tool. . In Workshop on Visualisation in Environmental Sciences (EnvirVis), S. Dutta, K. Feige, K. Rink, D. Zeckzer (eds.). The Eurographics Association, 2023.
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Assessing the agreement between the pneumatic and the flow-centrifuge method for estimating xylem safety in temperate diffuse-porous tree species. . In Plant Biology, 25, pp. 1171–1185. 2023.
2022[ to top ]
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Phylogenetic relatedness of food plants reveals highest insect herbivore specialisation at intermediate temperatures along a broad climatic gradient. . In Global Change Biology, p. in press. 2022.
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New proposal of epiphytic Bromeliaceae functional groups to include nebulophytes and shallow tanks. . In Plants, p. accepted. 2022.
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Critical links between biodiversity, nutrition and health in wild bee conservation. . In Trends in Ecology and Evolution, p. in press. 2022.
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In Vitro Rearing Changes Social Task Performance and Physiology in Honeybees. . In Insects, 13(1). 2022.
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Efficient permutation-based genome-wide association studies for normal and skewed phenotypic distributions. . In Bioinformatics, 38(Supplement\_2), pp. ii5-ii12. 2022.
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Interactive, Visual Simulation of a Spatio-Temporal Model of Gas Exchange in the Human Alveolus. . In Frontiers in Bioinformatics. Frontiers, 2022.
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Forest landscapes increase diversity of honeybee diets in the tropics. . In Forest Ecology and Management, p. in press. 2022.
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Putting vascular epiphytes on the traits map. . In Journal of Ecology, 110, pp. 340–358. 2022.
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Recognition and reconstruction of cell differentiation patterns with deep learning. . In arXiv, p. 2212.10058. 2022.
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A data-driven semantic segmentation model for direct cardiac functional analysis based on undersampled radial MR cine series. . In Magnetic Resonance in Medicine, 87(2), pp. 972–983. 2022.
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Scaling up our understanding of tipping points. . In Philosophical Transactions of the Royal Society B, 377, p. 20210386. 2022.
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Are chromosome number and genome size associated with habit and environmental niche variables? Insights from the Neotropical orchids. . In Annals of Botany, 130, pp. 11–25. 2022.
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Adjusting the range of cell-cell communication enables fine-tuning of cell fate patterns from checkerboard to engulfing. . In arXiv, p. 2211.07241. 2022.
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Spatiotemporal dynamics of freshwater macrophytes in Bavarian lakes under environmental change. . Universität Würzburg, 2022.
2021[ to top ]
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Many small rather than few large sources identified in long-term bee pollen diets in agroecosystems. . In Agriculture, Ecosystems and Environment. 2021.
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Functional resin use in solitary bees. . In Ecological Entomology, p. in press. 2021.
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gen3sis: The GENeral Engine for Eco-Evolutionary SImulationS on the origins of biodiversity. . In Plos Biology, 19, p. e3001340. 2021.
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How bees find a way in European cities: pollen metabarcoding unravels multiple feeding strategies and their effects on distribution patterns in four wild bee species. . In Journal of Applied Ecology, p. in press. 2021.
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Identifying {New} {Potential} {Biomarkers} in {Adrenocortical} {Tumors} {Based} on {mRNA} {Expression} {Data} {Using} {Machine} {Learning}. . In Cancers, 13(18), p. 4671. 2021.
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Transmission of Bacterial Symbionts With and Without Genome Erosion Between a Beetle Host and the Plant Environment. . In Frontiers in Microbiology, 12. Frontiers Media {SA}, 2021.
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Inferring core genome phylogenies for bacteria. . In Bacterial Pangenomics (in press), A. Mengoni, M. Fondi, G. Bacci (eds.). Springer Verlag, Heidelberg, Germany, 2021.
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Temporal environmental variation imposes differential selection on both genomic and ecological traits. . In Oikos, 130, pp. 1100–1115. 2021.
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Targeted volumetric single-molecule localization microscopy of defined presynaptic structures in brain sections. . In Communications Biology, 4(1), pp. 1–13. 2021.
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Species richness is more important for ecosystem functioning than species turnover along an elevational gradient. . In Nature Ecology and Evolution, p. in press. 2021.
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Subgroup-{Independent} {Mapping} of {Renal} {Cell} {Carcinoma}—{Machine} {Learning} {Reveals} {Prognostic} {Mitochondrial} {Gene} {Signature} {Beyond} {Histopathologic} {Boundaries}. . In Frontiers in Oncology, 11. 2021.
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Standard methods for pollen research. . In Journal of Apicultural Research, 60(4), pp. 1–109. Taylor & Francis, 2021.
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Propagule pressure and an invasion syndrome determine invasion success in a plant community model. . In Ecology and Evolution, 11, pp. 17106–17116. 2021.
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Niche evolution reveals disparate signatures of speciation in the ‘great speciator‘ (White-eyes, Aves: genus Zosterops). . In Journal of Biogeography, 48, pp. 1981–1993. 2021.
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On the way to routine cardiac MRI at 7 Tesla - a pilot study on consecutive 84 examinations. . In PLOS ONE, 16(7), pp. 1–18. Public Library of Science, 2021.
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Sensitivity analysis for interpretation of machine learning based segmentation models in cardiac {MRI}. . In BMC Medical Imaging, 21(1), p. 27. 2021.
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Open Science principles for accelerating trait-based science across the Tree of Life. . In Nature Ecology \& Evolution, pp. 294–303. Nature Publishing Group, 2021.
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Osmotic adaptation and compatible solute biosynthesis of phototrophic bacteria as revealed from genome analyses. . In Microorganisms, 9(1), p. 46. 2021.
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Self-configuring nnU-net pipeline enables fully automatic infarct segmentation in late enhancement MRI after myocardial infarction. . In European Journal of Radiology, 141, p. 109817. 2021.
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Pollen diets and niche overlap of honey bees and native bees in protected areas. . In Basic and Applied Ecology, Special issue: Sequence based molecular ecology. 2021.
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Preservation methods of honey-bee collected pollen are not a source of bias in ITS2 metabarcoding. . In Environmental Monitoring and Assessment, p. in press. 2021.
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Putative roles of bacteria in the carbon and nitrogen cycles in a tropical peat swamp forest. . In Basic and Applied Ecology, Special issue: Predictors of microbiomes. 2021.
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(More than) Hitchhikers through the network: The shared microbiome of bees and flowers. . In Current Opinion in Insect Science. 2021.
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B0 shimming of the human heart at 7T. . In Magnetic Resonance in Medicine, 85(1), pp. 182–196. 2021.
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Cryptic species and hidden ecological interactions of halictine bees along an elevational gradient. . In Ecology and Evolution. 2021.
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Agent-based modeling of the effects of forest dynamics, selective logging, and fragment size on epiphyte communities. . In Ecology and Evolution, (11), pp. 2937–2951. 2021.
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Active zone compaction correlates with presynaptic homeostatic potentiation. . In Cell Reports, 37(1). 2021.
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Depth diversity gradients of macrophytes: Shape, drivers, and recent shifts. . In Ecology and Evolution, 11(20), pp. 13830–13845. Wiley, 2021.
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Depth diversity gradients of macrophytes: shape, drivers and recent shifts. . In Ecology and Evolution, 11, pp. 13830–13845. 2021.
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An integrative environmental pollen diversity assessment and its importance for the Sustainable Development Goals. . In Plants, People, Planet, p. in press. 2021.
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Defining the {Basis} of {Cyanine} {Phototruncation} {Enables} a {New} {Approach} to {Single}-{Molecule} {Localization} {Microscopy}. . In ACS Central Science, 7(7), pp. 1144–1155. 2021.
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Dealing with software complexity in individual-based models. . In Methods in Ecology and Evolution, 12, pp. 2324–2333. 2021.
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Deep learning-based cardiac cine segmentation: Transfer learning application to 7T ultrahigh-field MRI. . In Magnetic Resonance in Medicine, 86(4), pp. 2179–2191. 2021.
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DNA sequence-based biodiversity and interaction ecology. . In Basic and Applied Ecology. 2021.
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Anthropogenic and environmental drivers shape diversity of non-native plants across the Pacific. . In Diversity and Distributions, 27, pp. 1120–1133. 2021.
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Effects of three flower field types on bumblebees and their pollen diets. . In Basic and Applied Ecology, 52, pp. 95–108. 2021.
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Changes amid constancy: flower and leaf microbiomes along land use gradients and between bioregions. . In Basic and Applied Ecology, 50, pp. 1–15. Elsevier {BV}, 2021.
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bioDIVERsity. Ein Computerspiel gegen das Imageproblem von Wasserpflanzen. . In Mitteilungen der Fränkischen Geographischen Gesellschaft, (67), pp. 29–36. 2021.
2020[ to top ]
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Mapping human pressures on biodiversity across the planet uncovers anthropogenic threat complexes. . In People and Nature, 2, pp. 380–394. 2020.
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Disentangling the drivers of local species richness using probabilistic species pools. . In Journal of Biogeography, (47), pp. 879–889. 2020.
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BCdatabaser: on-the-fly reference database creation for DNA (meta-)barcoding. . In Bioinformatics, p. in press. 2020.
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Susceptibility of red mason bee larvae to bacterial threats due to microbiome exchange with imported pollen provisions. . In Insects, 11(6). 2020.
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Macroecology in the age of big data – where to go from here?. . In Journal of Biogeography, 47, pp. 1–12. 2020.
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Efficient {Classification} of {White} {Blood} {Cell} {Leukemia} with {Improved} {Swarm} {Optimization} of {Deep} {Features}. . In Scientific Reports, 10(1), p. 2536. 2020.
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Strong phylogenetic constraint on transition metal incorporation in the mandibles of the hyper-diverse Hymenoptera (Insecta). . In Organisms, Diversity and Evolution, p. in press. 2020.
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CRISPR/Cas 9 mediated mutations as a new tool for studying taste in honeybees. . In Chemical Senses, p. bjaa063. 2020.
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Biological network growth in complex environments – a computational framework. . In PLOS Computational Biology, 16(11), p. e1008003. 2020.
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Cell fate clusters in ICM organoids arise from cell fate heredity and division: a modelling approach. . In Scientific Reports, 10(1), p. 22405-. 2020.
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DeepCLEM: automated registration for correlative light and electron microscopy using deep learning [version 1; peer review: awaiting peer review]. . In F1000Research, 9(1275). 2020.
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Integrating the underlying structure of stochasticity into community ecology. . In Ecology, 101, p. e02922. 2020.
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Chronic exposure to the pesticide flupyradifurone can lead to premature onset of foraging in honeybees (Apis mellifera). . In Journal of Applied Ecology, 57, pp. 609–618. 2020.
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Modeling how community assembly alters the functioning of ecosystems. . In bioRxiv. 2020.
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Introduced bees (Osmia cornifrons) collect pollen from both coevolved and novel host-plant species within their family-level phylogenetic preferences. . In Royal Society Open Science, p. in press. 2020.
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A systematic comparison of chloroplast genome assembly tools. . In Genome Biology, 21(1), p. 254. 2020.
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The transition from local to global patterns governs the differentiation of mouse blastocysts. . In PLOS ONE, 15(5), pp. 1–29. Public Library of Science, 2020.
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The effect of species extinctions on island biogeographic patterns. . In Ecological Research, 35, pp. 372–381. 2020.
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{{G}enomes of the {V}enus {F}lytrap and {C}lose {R}elatives {U}nveil the {R}oots of {P}lant {C}arnivory}. . In Curr Biol, 30(12), pp. 2312–2320. 2020.
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The genus Micromonospora as a model microorganism for bioactive natural product discovery. . In Royal Society of Chemistry Advances, 10(35), pp. 20939–20959. The Royal Society of Chemistry, 2020.
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Haruspex: {A} {Neural} {Network} for the {Automatic} {Identification} of {Oligonucleotides} and {Protein} {Secondary} {Structure} in {Cryo}-{Electron} {Microscopy} {Maps}. . In Angewandte Chemie International Edition, n/a(n/a). 2020.
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Exploring Ensemble Applications for Multi-sequence Myocardial Pathology Segmentation. . In Myocardial Pathology Segmentation Combining Multi-Sequence Cardiac Magnetic Resonance Images, X. Zhuang, L. Li (eds.), pp. 60–67. Springer International Publishing, Cham, 2020.
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{Eco-evolutionary agriculture: Host-pathogen dynamics in crop rotations}. . In PLoS Computational Biology, 16(1), p. e1007546. 2020.
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{{T}he {V}enus flytrap trigger hair-specific potassium channel {K}{D}{M}1 can reestablish the {K}+ gradient required for hapto-electric signaling}. . In PLoS Biol, 18(12), p. e3000964. 2020.
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Eco-evolutionary agriculture: Host-pathogen dynamics in crop rotations. . In PLoS Comput. Biol., 16(1), M. Bargués-Ribera; C. S. Gokhale (eds.). Center for Computational and Theoretical Biology (CCTB), 2020.
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Floral Species Richness Correlates with Changes in the Nutritional Quality of Larval Diets in a Stingless Bee. . In Insects, 11(2). 2020.
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Tracking beekeepers in floristic regions of Iran: employing DNA metabarcoding to determine the geographical origin of honey. . In Heliyon. 2020.
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{{H}ow to {G}row a {T}ree: {P}lant {V}oltage-{D}ependent {C}ation {C}hannels in the {S}potlight of {E}volution}. . In Trends Plant Sci. 2020.
2019[ to top ]
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Climate–land-use interactions shape tropical mountain biodiversity and ecosystem functions. . In Nature. 2019.
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Species richness change across spatial scales. . In Oikos. 2019.
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Understanding extinction debts: spatio-temporal scales, mechanisms and a roadmap for future research. . In Ecography, 42, pp. 1973–1990. 2019.
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A GABAergic and peptidergic sleep neuron as a locomotion stop neuron with compartmentalized Ca2+ dynamics. . In Nature Communications, 10(4095). 2019.
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Venus flytrap microbiota withstand harsh conditions during prey digestion. . In FEMS Microbiology Ecology, p. fiz010. 2019.
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{{V}enus flytrap microbiotas withstand harsh conditions during prey digestion}. . In FEMS Microbiol. Ecol., 95(3). 2019.
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Assessing predicted isolation effects from the general dynamic model of island biogeography with an eco-evolutionary model for plants. . In Journal of Biogeography, 46, pp. 1569–1581. 2019.
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Electron tomography of mouse LINC complexes at meiotic telomere attachment sites with and without microtubules. . In Communications Biology, 2(1), p. 376-. 2019.
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A minimal model for the latitudinal diversity gradient suggests a dominant role for ecological limits. . In The American Naturalist, (194), pp. E122-E133. 2019.
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Active zone compaction for presynaptic strength. . In bioRxiv. Cold Spring Harbor Laboratory, 2019.
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Drivers, diversity and functions of solitary bee microbiota. . In Trends in Microbiology, p. in press. 2019.
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Immersive Analysis of 3D Multi-cellular In-Vitro and In-Silico Cell Cultures. . In 2019 IEEE International Conference on Artificial Intelligence and Virtual Reality (AIVR), pp. 82–89. 2019.
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Interactions between ecological, evolutionary, and environmental processes unveil complex dynamics of insular plant diversity. . In Journal of Biogeography, 46, pp. 1582–1597. 2019.
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The dimensionality of stability depends on disturbance type. . In Ecology Letters, 22, pp. 674–684. 2019.
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Bacterial community structure and succession in nests of two megachilid bee genera. . In FEMS Microbiology Ecology, 95(1), p. fiy218. 2019.
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Towards a {Connectomic} {Description} of the {Osteocyte} {Lacunocanalicular} {Network} in {Bone}. . In Current Osteoporosis Reports. 2019.
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The latitudinal diversity gradient - novel understanding through mechanistic eco-evolutionary models. . In Trends in Ecology & Evolution, 34, pp. 211–223. 2019.
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Linking the foraging patterns of megachilid bee species to nest bacteria. . In Ecology and Evolution, p. in press. 2019.
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{{A}cquiring {C}ontrol: {T}he {E}volution of {S}tomatal {S}ignalling {P}athways}. . In Trends Plant Sci., 24(4), pp. 342–351. 2019.
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Surface tension determines tissue shape and growth kinetics. . In Science Advances, 5(9), p. eaav9394. 2019.
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Honey bee waggle dance communication increases diversity of pollen diets in intensively managed agricultural landscapes. . In Molecular Ecology, p. in press. 2019.
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Mouse ICM organoids reveal three-dimensional cell fate clustering. . In Biophysical Journal, 116, pp. 127–141. Elsevier, 2019.
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An Introduction to Image-Based Systems Biology of Multicellular Spheroids for Experimentalists and Theoreticians. . In Computational Biology, H. Husi (ed.). Codon Publications, Brisbane, Australia, 2019.
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Cold-adaptation of Subtercola vilae DB165T, an isolate from a high-altitude cold volcano lake, as revealed by its genome analysis. . 2019.
2018[ to top ]
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Tensile forces drive a reversible fibroblast-to-myofibroblast transition during tissue growth in engineered clefts. . In Science Advances, 4(1), p. eaao4881. 2018.
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The characterization of the circadian clock in the olive fly Bactrocera oleae (Diptera: Tephritidae) reveals a Drosophila-like organization. . In Scientific Reports, 8(1), p. 816. 2018.
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Spatial scaling of extinction rates: theory and data reveal non-linearity, and a major upscaling and downscaling challenge. . In Global Ecology and Biogeography, 27, pp. 2–13. 2018.
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Automated classification of synaptic vesicles in electron tomograms of C. elegans using machine learning. . In PLoS one, 13(10), p. e0205348. Public Library of Science, 2018.
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Wild bees and their nests host Paenibacillus bacteria with functional potential of avail. . In Microbiome, (6), p. 229. 2018.
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reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome. . In Journal of Open Source Software, 3(22), p. 527. 2018.
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Microbial community structure in a Malaysian tropical peat swamp forest: the influence of tree species and depth. . In Frontiers in Microbiology, 9, p. 2859. 2018.
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Integrating community assembly and biodiversity reveals new dimensions of ecosystem functions: the Community Assembly and the Functioning of Ecosystems (CAFE) approach. . In Ecology Letters, 21, pp. 167–180. 2018.
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Draft Genome Sequence of Dyella sp. Strain C11, Isolated from a Malaysian Tropical Peat Swamp Forest. . In Genome announcements, 6(25), pp. e00459–18. Am Soc Microbiol, 2018.
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Draft Genome Sequence of Dyella sp. Strain C9, Isolated from a Malaysian Tropical Peat Swamp Forest. . In Microbiol Res Announc, 7(12), pp. e01083–18. Am Soc Microbiol, 2018.
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Draft Genome Sequence of Klebsiella sp. Strain C31 Isolated from a Malaysian Tropical Peat Swamp Forest. . In Genome announcements, 6(25), pp. e00560–18. Am Soc Microbiol, 2018.
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Draft Genome Sequence of Paraburkholderia sp. Strain C35, Isolated from a Malaysian Tropical Peat Swamp Forest. . In Genome announcements, 6(25), pp. e00561–18. Am Soc Microbiol, 2018.
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Natural allelic variation of the AZI1 gene controls root growth under zinc-limiting condition. . In PLOS Genetics, 14(4), pp. 1–23. Public Library of Science, 2018.
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Draft Genome Sequence of Paraburkholderia sp. Strain C35, Isolated from a Malaysian Tropical Peat Swamp Forest. . In Genome Announcements, 6(25). American Society for Microbiology Journals, 2018.
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Physical contact between mesenchymal stem cells and endothelial precursors induces distinct signatures with relevance to the very early phase of regeneration. . In Journal of Cellular Biochemistry. 2018.
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FENNEC - Functional Exploration of Natural Networks and Ecological Communities. . In Methods in Ecology and Evolution, pp. 2028–2033. 2018.
2017[ to top ]
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The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog. . In Nucleic Acids Research, p. gkx954. 2017.
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The Small World of Osteocytes: Connectomics of the Lacuno-Canalicular Network in Bone. . In New Journal of Physics, 19, p. 073019. 2017.
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Honey bee foraging ecology: Season but not landscape diversity shapes the amount and diversity of collected pollen. . In PloS one, 12(8), p. e0183716. Public Library of Science, 2017.
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Genetic Components of Root Architecture Remodeling in Response to Salt Stress. . In The Plant Cell. American Society of Plant Biologists, 2017.
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Flagship umbrella species needed for conservation of overlooked biodiversity. . In Conservation Biology, 31, pp. 481–485. 2017.
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FIJI Macro 3D ART VeSElecT: 3D Automated Reconstruction Tool for Vesicle Structures of Electron Tomograms. . In PLOS Computational Biology, 13(1), pp. 1–21. Public Library of Science, 2017.
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Interactions between ecological, evolutionary, and environmental processes unveil complex dynamics of island biodiversity. . In bioRxiv, (099978). 2017.
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Release from prey preservation behavior via prey switch allowed diversification of cuticular hydrocarbon profiles in digger wasps. . In Evolution, in press. 2017.
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Effects of time and isolation on plant diversity: testing island biogeography theory with an eco-evolutionary model. . In bioRxiv, (100289). 2017.
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AraPheno: a public database for Arabidopsis thaliana phenotypes. . In Nucleic acids research, 45(D1), pp. D1054-D1059. Oxford University Press, 2017.
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Karyotype diversity and genome size variation in Neotropical Maxillariinae orchids. . In Plant Biology, 19, pp. 298–308. 2017.
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AliTV - interactive visualization of whole genome comparisons. . In PeerJ Comput. Sci., 3, p. e116. 2017.
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{Social dilemma in the external immune system of the red flour beetle? It is a matter of time}. . In Ecology and Evolution, 7(17), pp. 6758–6765. 2017.
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Biodiversity dynamics on islands: explicitly accounting for causality in mechanistic models. . In Diversity, 9(30). 2017.
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Spatial heterogeneity in the canalicular density of the osteocyte network in human osteons. . In Bone Reports, 6, pp. 101–108. 2017.
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Mechanistic models in macroecology and biogeography: state-of-art and prospects. . In Ecography, 40(267-280). 2017.
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An individual-based model for the collective cancer cell migration explains speed dynamics and phenotype variability in response to growth factors. . In NPJ Systems Biology and Applications, 3, p. Art. no. 5. 2017.
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Coalignment of osteocyte canaliculi and collagen fibers in human osteonal bone. . In Journal of Stuctural Biology, 199, pp. 177–186. 2017.
2016[ to top ]
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{{G}ating of the two-pore cation channel {A}t{T}{P}{C}1 in the plant vacuole is based on a single voltage-sensing domain}. . In Plant Biol (Stuttg), 18(5), pp. 750–760. 2016.
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{{G}enome of a tardigrade: {H}orizontal gene transfer or bacterial contamination?}. . In Proc. Natl. Acad. Sci. U.S.A. 2016.
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biojs-io-biom, a {BioJS} component for handling data in Biological Observation Matrix ({BIOM}) format. . In F1000Research, 5, p. 2348. F1000 Research, Ltd., 2016.
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{{V}enus flytrap carnivorous lifestyle builds on herbivore defense strategies}. . In Genome Res., 26(6), pp. 812–825. 2016.
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Leaf growth response to mild drought: natural variation in Arabidopsis sheds light on trait architecture. . In The Plant Cell, 28(10), pp. 2417–2434. American Society of Plant Biologists, 2016.
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{{A}{L}{V}{I}{S}: interactive non-aggregative visualization and explorative analysis of multiple sequence alignments}. . In Nucleic Acids Res., 44(8), p. e77. 2016.
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1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana. . In Cell, 166(2), pp. 481–491. 2016.
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TBro: visualization and management of de novo transcriptomes. . In Database, 2016. 2016.
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{{W}{H}{A}{M}{Y} is a novel actin polymerase promoting myoblast fusion, macrophage cell motility and sensory organ development in {D}rosophila}. . In J. Cell. Sci., 129(3), pp. 604–620. 2016.
2015[ to top ]
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{{I}{T}{S}2 {D}atabase {V}: {T}wice as {M}uch}. . In Mol. Biol. Evol., 32(11), pp. 3030–3032. 2015.
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ITS2 Database V: Twice as Much. . In Molecular Biology and Evolution, 32(11), pp. 3030–3032. 2015.
2014[ to top ]
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Evolutionary Multiplayer Games. . In Dyn. Games Appl., 4(4), C. S. Gokhale; A. Traulsen (eds.), pp. 468–488. Center for Computational and Theoretical Biology (CCTB), 2014.
2013[ to top ]
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{Dynamic Properties of Evolutionary Multi-player Games in Finite Populations}. . In Games, 4(2), pp. 182–199. Center for Computational and Theoretical Biology (CCTB), 2013.
2009[ to top ]
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MtSNPscore: a combined evidence approach for assessing cumulative impact of mitochondrial variations in disease. . In BMC Bioinform., 10(S-8), p. 7. 2009.